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Cancer Genomics

Context: 

  • As part of the U.K. ‘s ongoing ‘100000 Genome Project’, a study of over 13,800 cancer patients has been published suggesting cancer genomics could transform cancer care.
  • Enhanced Customization in Cancer Therapy: The program showed how genome sequencing combined with regular clinical data could increase the level of customization in cancer therapy. 

About Cancer Genomics

  • It studies the totality of DNA sequence and gene expression differences between tumour cells and normal host cells.

The Cancer Genome Atlas Program (TCGA)

  • It is a landmark cancer genomics program, molecularly characterised over 20,000 primary cancers and matched normal samples spanning 33 cancer types. 
  • This joint effort between NCI and the National Human Genome Research Institute began in 2006, bringing together researchers from diverse disciplines and multiple institutions.

About Cancer

  • Cancer is a disease of the genome which is caused by changes in genes that cause some cells to divide in an uncontrolled way. 
  • Causes: These changes can be inherited or acquired. Inherited genetic variants form the basis of many hereditary cancers, including breast and ovarian cancer. 
  • Major Public Health Concern: Cancer has emerged as a major public health concern worldwide with about 20 million new patients being added every year. 
    • According to estimates from the World Health Organization, over the next ten years, the incidence of cancer will rise by about 60%, making it the second leading cause of death. 
    • According to the National Cancer Registry, there are almost 1.4 million new cancer cases in India alone each year, accounting for nearly 1 in 1,000 diagnoses among Indians.

100000 Genomes Project

  • Genome Sequencing Analysis: Under this 100000 Genomes Project, researchers obtained, sequenced, and analysed the genomes of people with different types of cancers. 
    • Their analysis can be applied in clinical settings to guide treatment strategies for cancer patients.
  • Identifying New Target for Treatment: The study found that a greater percentage of those with lung or bowel cancers as well as those with brain tumours had unique DNA alterations that may serve as new targets for treatment. 
  • Insights into ovarian cancers and sarcomas: The study also provided insights that could reshape even the understanding of challenging conditions like ovarian cancers and sarcomas.
    • For example, approximately 10% of sarcomas (rare cancers of the bone and soft tissue) exhibited genetic changes that could impact treatment decisions. 
    • The researchers also identified a corresponding proportion of ovarian cancers as being potentially inherited.

Significance of 100000 Genomes Project

  • Harnessing Genomic Medicine for Enhanced Cancer Care:  The impetus behind this study aligns with the vision of England’s public health system.
    • The National Health Service (NHS) has been keen on understanding how genomic medicine can be harnessed to enhance cancer care. 
  • Realisation of Precision Medicine: The study signifies the realisation of the promise of precision medicine, envisioned with the launch of the 100000 Genomes Project.
  • Under the project, patients were recruited as part of a larger genomics initiative whose focus was as much cancer as rare genetic diseases.
  • Real World Applications: The lessons learned from it are finding real-world applications in some parts of the U.K. 
    • Hospital trusts in East Midlands are incorporating insights from genome-sequencing and referring individuals with certain genetic mutations to clinical trials for certain therapies.

Precision Oncology

  • Precision Oncology is an innovative approach to cancer treatment that ensures  treatment is specifically designed and targeted to unique forms of cancer. 
  • It’s the science of using each patient’s individual genetics – the genes that are mutated, causing their cancer to grow – to create a treatment protocol just for them, based on those genetic mutations.

Limitations of Precision Medicine in Cancer

  • Requirements for Gene or Protein Alterations in Cancer Cells: Eligibility for participation in a precision medicine clinical trial requires specific gene or protein alterations in the individual’s cancer cells, aligning with the targeted therapy under investigation. 
  • Accessibility Challenges: Access to precision medicine trials is frequently restricted to larger cancer centres, potentially limiting opportunities for participation among certain individuals.
  • Increased Costs: Tests for gene and protein changes can be expensive, especially if many changes are being tested for, and insurance might not cover all testing costs.
  • Koita Centre for Digital Oncology (KCDO): The National Cancer Grid (NCG) has established the KCDO to promote use of digital technologies and tools to improve cancer care across India.
  • Enhancing Facilities for Tertiary Care of Cancer: The Central Government is implementing the Strengthening of Tertiary Care of Cancer Scheme in order to enhance the facilities for tertiary care of cancer. 
    • 19 State Cancer Institute’s (SCIs) and 20 Tertiary Care Cancer Centres (TCCCs) have been approved so far under the said scheme.
  • Focus on Oncology in All India Institute of Medical Sciences (AIIMS): Significant focus on Oncology in its various aspects has been ensured in the new AIIMSthat are being established under the aegis of Pradhan Mantri Swasthya Suraksha Yojana (PMSSY).
  • Diagnosis and Treatment of Cancer under Ayushman Bharat: Screening of three common cancers i.e. oral, breast and cervical along with other common Non-Communicable Diseases, is an integral part of service delivery under the AB-HWCs.


Also Read: 

News Source: The Hindu

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